Publications

2022

  • Lu, H., Ping, J., Zhou, G., Zhao, Z., Gao, W., Jiang, Y., Quan, C., Lu, Y., and Zhou, G. (2022). CommPath: An R package for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics. Comput Struct Biotechnology J. doi: 10.1016/j.csbj.2022.10.028.
  • Lu, Y., Yang, A., Quan, C., Pan, Y., Zhang, H., Li, Y., Gao, C., Lu, H., Wang, X., Cao, P., et al. (2022). A single-cell atlas of the multicellular ecosystem of primary and metastatic hepatocellular carcinoma. Nat Commun 13, 4594. doi: 10.1038/s41467-022-32283-3.
  • Ma, L., Ye, Y., Lu, H., Xing, Y., Zhao, Z., Quan, C., Jia, Z., Lu, Y., Li, Y., and Zhou, G. (2022). A Study on the Radiosensitivity of Radiation-Induced Lung Injury at the Acute Phase Based on Single-Cell Transcriptomics. Front Immunol 13, 941976. doi: 10.3389/fimmu.2022.941976.
  • Quan, C., Lu, H., Lu, Y., and Zhou, G. (2022). Population-scale genotyping of structural variation in the era of long-read sequencing. Comput Struct Biotechnology J. doi: 10.1016/j.csbj.2022.05.047.
  • Quan, C., Ping, J., Lu, H., Zhou, G., and Lu, Y. (2022). 3DSNP 2.0: update and expansion of the noncoding genomic variant annotation database. Nucleic Acids Res 50, D950–D955. doi: 10.1093/nar/gkab1008.

2021

  • Lu, H., Ma, L., Quan, C., Li, L., Lu, Y., Zhou, G., and Zhang, C. (2021). RegVar: Tissue-specific Prioritization of Noncoding Regulatory Variants. Genom Proteom Bioinform. doi: 10.1016/j.gpb.2021.08.011.
  • Quan, C., Li, Y., Liu, X., Wang, Y., Ping, J., Lu, Y., and Zhou, G. (2021). Characterization of structural variation in Tibetans reveals new evidence of high-altitude adaptation and introgression. Genome Biol 22, doi: 159.10.1186/s13059-021-02382-3.

Preprints

  • Lu, Y., Yang, A., Quan, C., Zhang, H., Pan, Y., Li, Y., Gao, C., Lu, H., Cao, P., Chen, H., et al. (2020). A Single-Cell Atlas of the Multicellular Ecosystem of Primary and Metastatic Hepatocellular Carcinoma. Ssrn Electron J. doi: 10.2139/ssrn.3624436.
  • Quan, C., Li, Y., Wang, Y., Ping, J., Lu, Y., and Zhou, G. (2020). Characterization of Structural Variation in Tibetans Reveals New Evidence of High-altitude Adaptation and Introgression. Biorxiv, 2020.12.01.401174. doi: 10.1101/2020.12.01.401174.